HalophFGD

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Basic Information
Locus ID: Zma_g4958
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr03 3285429 3286742 + Zma_g4958
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.75 44,901.37 Da 45.15 99.02 -0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52047 RNI-like 186 275 1.49E-5 -
SUPERFAMILY SSF81383 F-box domain 7 64 1.96E-9 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002461735.2 uncharacterized protein LOC8081787 [Sorghum bicolor] 0
TrEMBL A0A5J9VXS1 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_13334 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 13 AH03.2687, AH03.692, AH03.694, BH03.2828, BH03.454, BH03.819 ...
BH03.824, BH03.833, CH03.3031, CH03.913, CH03.918, CH03.922, CH03.936
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_1AG0011080, gene-QOZ80_7AG0561550 ...
gene-QOZ80_7BG0594810, gene-QOZ80_7BG0595060
Poaceae Lolium multiflorum 2 gene-QYE76_018786, gene-QYE76_025567
Poaceae Oryza coarctata 4 Oco14G004560, Oco14G004620, Oco14G005020, Oco14G005130
Poaceae Oryza sativa 1 LOC_Os07g13930.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G109200, gene-BS78_02G109400
Poaceae Sporobolus alterniflorus 2 Chr19G015760, Chr28G003740
Poaceae Zoysia japonica 2 nbis-gene-49405, nbis-gene-49406
Poaceae Zoysia macrostachya 4 Zma_g4955, Zma_g4956, Zma_g4957, Zma_g4958
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.