Basic Information
Locus ID:
Zma_g4759
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr03 | 1007099 | 1012916 | + | Zma_g4759 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 96,360.32 Da | 48.16 | 78.94 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 707 | 861 | 4.11019E-64 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 243 | 860 | 1.8E-81 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 241 | 862 | 1.41E-108 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 666 | 864 | 3.1E-56 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 233 | 466 | 1.7E-65 | - |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 243 | 863 | 55.610321 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 805 | 822 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 244 | 259 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 612 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 619 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22030.1 | ubiquitin-specific protease 8. | 0 |
| RefSeq | XP_034581952.1 | ubiquitin carboxyl-terminal hydrolase 8-like [Setaria viridis] | 0 |
| Q9C585 | Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana OX=3702 GN=UBP8 PE=2 SV=2 | 0 | |
| TrEMBL | A0A4U6VLG6 | Ubiquitin carboxyl-terminal hydrolase OS=Setaria viridis OX=4556 GN=SEVIR_2G042700v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology