Basic Information
Locus ID:
Zma_g4548
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr02 | 19553163 | 19556390 | - | Zma_g4548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.38 | 55,893.79 Da | 45.98 | 68.86 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 253 | 309 | 1.4E-5 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 373 | 413 | 0.011 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 333 | 368 | 9.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 462 | 498 | 1.4E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 208 | 499 | 3.2E-60 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 195 | 503 | 1.1E-125 | IPR015943 |
| SMART | SM00320 | WD40_4 | 329 | 368 | 1.7E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 416 | 456 | 200.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 459 | 498 | 3.2E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 245 | 285 | 0.1 | IPR001680 |
| SMART | SM00320 | WD40_4 | 371 | 413 | 4.9E-4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 201 | 242 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 288 | 325 | 0.038 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 466 | 499 | 14.084198 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 466 | 499 | 11.65559 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 336 | 368 | 11.049229 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 336 | 368 | 13.315579 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 378 | 422 | 8.570195 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 253 | 294 | 8.703868 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 485 | 499 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_025793598.1 | protein FIZZY-RELATED 2-like [Panicum hallii] | 0 |
| Q8L3Z8 | Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=FZR2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WMT1 | ANAPC4_WD40 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08215 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology