Basic Information
Locus ID:
Zma_g33472
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
PHD zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr20 | 20816639 | 20826888 | - | Zma_g33472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 94,154.16 Da | 53.12 | 73.59 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 253 | 307 | 2.0E-16 | IPR032308 |
| Pfam | PF00628 | PHD-finger | 500 | 541 | 8.4E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 433 | 481 | 6.5E-17 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 481 | 542 | 2.26E-15 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 587 | 642 | 1.05E-8 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 738 | 833 | 3.88E-8 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 486 | 566 | 1.1E-16 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 685 | 845 | 3.8E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 587 | 646 | 3.1E-11 | IPR013083 |
| SMART | SM00249 | PHD_3 | 499 | 540 | 1.8E-10 | IPR001965 |
| SMART | SM00249 | PHD_3 | 587 | 643 | 9.5E-6 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 497 | 542 | 10.5135 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 500 | 539 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 215 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 34 | 103 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021304442.1 | uncharacterized protein LOC8066402 [Sorghum bicolor] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T884 | PHD-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_40850 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology