HalophFGD

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Basic Information
Locus ID: Zma_g33229
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: BTB-POZ and MATH domain
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr20 19348420 19349469 - Zma_g33229
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.76 38,645.86 Da 50.78 86.42 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 15 141 1.01168E-14 IPR002083
Pfam PF00651 BTB/POZ domain 172 281 1.8E-26 IPR000210
SUPERFAMILY SSF54695 POZ domain 165 282 1.29E-29 IPR011333
SUPERFAMILY SSF49599 TRAF domain-like 9 149 1.64E-20 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 160 279 7.9E-36 IPR011333
Gene3D G3DSA:1.25.40.420 - 284 348 5.5E-19 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 145 9.2E-19 IPR008974
SMART SM00225 BTB_4 181 284 1.7E-20 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 181 248 17.520699 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 10 140 11.953007 IPR002083
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_025811393.1 BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A0A9DLS0 BTB domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 5 AH06.2612, BH06.2420, BH06.2421, BH06.2422, CH06.2709
Poaceae Eleusine coracana subsp. coracana 12 gene-QOZ80_5AG0391060, gene-QOZ80_6AG0515720 ...
gene-QOZ80_6AG0547660, gene-QOZ80_6AG0547680, gene-QOZ80_6AG0547700, gene-QOZ80_6AG0547710, gene-QOZ80_6BG0501300, gene-QOZ80_6BG0501320, gene-QOZ80_6BG0501340, gene-QOZ80_6BG0501350, gene-QOZ80_6BG0501360, gene-QOZ80_7AG0564860
Poaceae Hordeum vulgare 9 HORVU.MOREX.r3.7HG0724460.1.CDS1 ...
HORVU.MOREX.r3.7HG0724690.1.CDS1, HORVU.MOREX.r3.7HG0736960.1.CDS1, HORVU.MOREX.r3.7HG0737010.1.CDS1, HORVU.MOREX.r3.7HG0737030.1.CDS1, HORVU.MOREX.r3.7HG0737070.1.CDS1, HORVU.MOREX.r3.7HG0737090.1.CDS1, HORVU.MOREX.r3.7HG0737240.1.CDS1, HORVU.MOREX.r3.7HG0737300.1.CDS1
Poaceae Lolium multiflorum 19 gene-QYE76_001932, gene-QYE76_001934, gene-QYE76_001937 ...
gene-QYE76_014272, gene-QYE76_020497, gene-QYE76_034670, gene-QYE76_034671, gene-QYE76_034695, gene-QYE76_036220, gene-QYE76_036221, gene-QYE76_036227, gene-QYE76_036232, gene-QYE76_036233, gene-QYE76_036234, gene-QYE76_036240, gene-QYE76_036248, gene-QYE76_036249, gene-QYE76_036250, gene-QYE76_036252
Poaceae Oryza coarctata 4 Oco11G006600, Oco11G014910, Oco12G015040, Oco12G015070
Poaceae Oryza sativa 5 LOC_Os06g14060.1, LOC_Os06g45720.1, LOC_Os06g45730.1 ...
LOC_Os06g45790.1, LOC_Os08g09830.1
Poaceae Paspalum vaginatum 7 gene-BS78_10G106800, gene-BS78_10G221900 ...
gene-BS78_10G222400, gene-BS78_10G222500, gene-BS78_10G222600, gene-BS78_10G222700, gene-BS78_10G222800
Poaceae Puccinellia tenuiflora 4 Pt_Chr0103206, Pt_Chr0103207, Pt_Chr0103208, Pt_Chr0401303
Poaceae Sporobolus alterniflorus 4 Chr10G019930, Chr10G019940, Chr11G002710, Chr27G005970
Poaceae Thinopyrum elongatum 12 Tel7E01G682200, Tel7E01G797600, Tel7E01G799300 ...
Tel7E01G799900, Tel7E01G800000, Tel7E01G800200, Tel7E01G800300, Tel7E01G800400, Tel7E01G800500, Tel7E01G800700, Tel7E01G801600, Tel7E01G803200
Poaceae Triticum dicoccoides 19 gene_TRIDC7AG055940, gene_TRIDC7AG065750 ...
gene_TRIDC7AG065900, gene_TRIDC7AG065940, gene_TRIDC7AG065960, gene_TRIDC7AG065990, gene_TRIDC7AG066010, gene_TRIDC7AG066030, gene_TRIDC7AG066050, gene_TRIDC7AG066110, gene_TRIDC7BG059400, gene_TRIDC7BG059460, gene_TRIDC7BG059480, gene_TRIDC7BG059490, gene_TRIDC7BG059500, gene_TRIDC7BG059530, gene_TRIDC7BG059710, gene_TRIDC7BG059730, gene_TRIDC7BG059750
Poaceae Triticum aestivum 36 TraesCS7A02G401800.1.cds1, TraesCS7A02G471200.1.cds1 ...
TraesCS7A02G471400.1.cds1, TraesCS7A02G471800.1.cds1, TraesCS7A02G471900.1.cds1, TraesCS7A02G472000.1.cds1, TraesCS7A02G472200.1.cds1, TraesCS7A02G472400.1, TraesCS7A02G472500.1, TraesCS7A02G472800.1.cds1, TraesCS7A02G473100.1, TraesCS7A02G473500.1.cds1, TraesCS7A02G474300.1.cds1, TraesCS7A02G474500.1.cds1, TraesCS7B02G373200.1.cds1, TraesCS7B02G373600.1.cds1, TraesCS7B02G373700.1.cds1, TraesCS7B02G373800.1, TraesCS7B02G373900.2, TraesCS7B02G374000.1.cds1, TraesCS7B02G374200.1, TraesCS7B02G375000.1, TraesCS7B02G375700.1.cds1, TraesCS7B02G375800.1.cds1, TraesCS7B02G376100.1.cds1, TraesCS7D02G395400.1, TraesCS7D02G458600.1.cds1, TraesCS7D02G459200.1.cds1, TraesCS7D02G459300.1.cds1, TraesCS7D02G459400.1.cds1, TraesCS7D02G459500.1.cds1, TraesCS7D02G459600.1, TraesCS7D02G459700.1.cds1, TraesCS7D02G459800.1.cds1, TraesCS7D02G460100.1.cds1, TraesCS7D02G461300.1.cds1
Poaceae Zea mays 8 Zm00001eb274280_P004, Zm00001eb274300_P001 ...
Zm00001eb274310_P001, Zm00001eb274320_P001, Zm00001eb305500_P001, Zm00001eb306050_P002, Zm00001eb389910_P001, Zm00001eb409490_P001
Poaceae Zoysia japonica 3 nbis-gene-40524, nbis-gene-40525, nbis-gene-43180
Poaceae Zoysia macrostachya 3 Zma_g29449, Zma_g33228, Zma_g33229
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