Basic Information
Locus ID:
Zma_g32745
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr20 | 16201512 | 16202756 | + | Zma_g32745 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 47,855.44 Da | 55.64 | 86.21 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08268 | F-box associated domain | 220 | 329 | 5.9E-5 | IPR013187 |
| Pfam | PF00646 | F-box domain | 21 | 57 | 6.8E-10 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 19 | 84 | 1.57E-15 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 104 | 268 | 4.97E-6 | IPR011043 |
| Gene3D | G3DSA:1.20.1280.50 | - | 19 | 55 | 7.3E-7 | - |
| SMART | SM00256 | fbox_2 | 19 | 59 | 2.6E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 114 | 350 | 1.1E-27 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G50870.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021308737.1 | putative F-box protein At3g17480 [Sorghum bicolor] | 0 |
| Q9C6J3 | Putative F-box protein At1g50870 OS=Arabidopsis thaliana OX=3702 GN=At1g50870 PE=4 SV=1 | 0 | |
| TrEMBL | A0A811N462 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS12648 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology