Basic Information
Locus ID:
Zma_g32697
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr20 | 15874440 | 15880884 | - | Zma_g32697 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.69 | 97,855.68 Da | 56.75 | 65.81 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 333 | 635 | 3.24017E-131 | - |
| Pfam | PF01753 | MYND finger | 103 | 140 | 5.3E-9 | IPR002893 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 332 | 634 | 2.4E-46 | IPR001394 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 328 | 640 | 1.49E-85 | IPR038765 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 100 | 141 | 3.49E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 325 | 647 | 3.9E-92 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 93 | 143 | 1.3E-12 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 103 | 140 | 12.233541 | IPR002893 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 332 | 637 | 51.690643 | IPR028889 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 103 | 140 | - | IPR002893 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 333 | 348 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 843 | 868 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 714 | 741 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 843 | 879 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 700 | 741 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65450.1 | ubiquitin-specific protease 17. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_004957062.1 | ubiquitin carboxyl-terminal hydrolase 17 [Setaria italica] | 0 |
| Q9FKP5 | Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana OX=3702 GN=UBP17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TF20 | USP domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_43369 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology