Basic Information
Locus ID:
Zma_g32648
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Protein of unknown function (DUF1644)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr20 | 15540483 | 15541217 | - | Zma_g32648 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.22 | 27,444.11 Da | 62.85 | 74.80 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07800 | Protein of unknown function (DUF1644) | 103 | 189 | 6.1E-29 | IPR012866 |
| Pfam | PF07800 | Protein of unknown function (DUF1644) | 49 | 102 | 1.3E-22 | IPR012866 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 39 | 163 | 1.5E-6 | IPR013083 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68140.2 | Protein of unknown function (DUF1644). | 0 |
| RefSeq | XP_039795421.1 | uncharacterized protein LOC120660841 isoform X2 [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9TEM7 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_43280 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0537030, gene-QOZ80_6BG0490360 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0485840.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_005592 |
| Poaceae | Oryza coarctata | 2 | Oco17G006270, Oco18G006450 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g27860.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G200900 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr14G015000, Chr21G014050 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G379600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG037150, gene_TRIDC5BG039130 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G234600.1.cds1, TraesCS5B02G233100.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb100600_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g32648 |