Basic Information
Locus ID:
Zma_g3237
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Protein DA1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr02 | 6323045 | 6328809 | - | Zma_g3237 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 62,421.91 Da | 51.56 | 79.69 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09396 | LIM_DA1 | 192 | 244 | 1.79096E-28 | - |
| Pfam | PF00412 | LIM domain | 192 | 246 | 1.3E-10 | IPR001781 |
| Pfam | PF12315 | Protein DA1 | 341 | 551 | 3.8E-99 | IPR022087 |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 186 | 217 | 2.58E-8 | - |
| SUPERFAMILY | SSF57716 | Glucocorticoid receptor-like (DNA-binding domain) | 218 | 273 | 1.32E-9 | - |
| Gene3D | G3DSA:2.10.110.10 | Cysteine Rich Protein | 185 | 266 | 1.6E-16 | - |
| SMART | SM00726 | uim | 82 | 101 | 45.0 | IPR003903 |
| SMART | SM00726 | uim | 132 | 151 | 0.0058 | IPR003903 |
| SMART | SM00132 | lim_4 | 191 | 243 | 7.1E-14 | IPR001781 |
| ProSiteProfiles | PS50330 | Ubiquitin-interacting motif (UIM) domain profile. | 132 | 151 | 10.611761 | IPR003903 |
| ProSiteProfiles | PS50023 | LIM domain profile. | 190 | 250 | 12.6424 | IPR001781 |
| ProSitePatterns | PS00478 | LIM zinc-binding domain signature. | 192 | 226 | - | IPR001781 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G36860.1 | LIM domain-containing protein. | 0 |
| RefSeq | XP_039783340.1 | protein DA1-related 1-like isoform X2 [Panicum virgatum] | 0 |
| Q8W4F0 | Protein DA1-related 1 OS=Arabidopsis thaliana OX=3702 GN=DAR1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2T7C3J7 | LIM zinc-binding domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G156300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology