Basic Information
Locus ID:
Zma_g32020
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr20 | 9716290 | 9725283 | - | Zma_g32020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.02 | 77,429.63 Da | 67.31 | 62.51 | -1.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 624 | 664 | 1.97611E-21 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 622 | 669 | 9.7E-12 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 624 | 670 | 2.94E-8 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 606 | 676 | 3.7E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 625 | 664 | 10.910707 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 265 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 282 | 340 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 231 | 246 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 473 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 180 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 83 | - | - |
| Coils | Coil | Coil | 554 | 574 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_034580794.1 | uncharacterized protein LOC117844138 [Setaria viridis] | 0 |
| TrEMBL | A0A5J9THB1 | RING-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_44171 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology