Basic Information
Locus ID:
Zma_g31271
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr20 | 424726 | 427912 | + | Zma_g31271 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 43,953.10 Da | 46.33 | 95.62 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00023 | Ankyrin repeat | 194 | 221 | 4.2E-4 | IPR002110 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 82 | 176 | 6.7E-18 | IPR020683 |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 14 | 75 | 1.0E-6 | IPR020683 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 16 | 247 | 6.5E-48 | IPR036770 |
| SUPERFAMILY | SSF57850 | RING/U-box | 292 | 354 | 3.02E-7 | - |
| Gene3D | G3DSA:1.25.40.20 | - | 185 | 251 | 2.5E-10 | IPR036770 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 287 | 363 | 4.6E-6 | IPR013083 |
| Gene3D | G3DSA:1.25.40.20 | - | 10 | 109 | 8.0E-23 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 110 | 184 | 8.6E-18 | IPR036770 |
| SMART | SM00248 | ANK_2a | 149 | 178 | 2.3E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 44 | 73 | 3.0E-6 | IPR002110 |
| SMART | SM00248 | ANK_2a | 193 | 222 | 7.9E-4 | IPR002110 |
| SMART | SM00248 | ANK_2a | 111 | 141 | 0.0073 | IPR002110 |
| SMART | SM00248 | ANK_2a | 77 | 106 | 150.0 | IPR002110 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 299 | 348 | 9.981268 | IPR001841 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 44 | 75 | 13.469215 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 149 | 176 | 11.001797 | - |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 111 | 132 | 9.065006 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 111 | 132 | 9.08357 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 44 | 76 | 14.372149 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 149 | 181 | 11.48747 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 193 | 225 | 11.94154 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 193 | 219 | 11.346704 | - |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 314 | 323 | - | IPR017907 |
| PRINTS | PR01415 | Ankyrin repeat signature | 150 | 165 | 8.5E-5 | IPR002110 |
| PRINTS | PR01415 | Ankyrin repeat signature | 209 | 223 | 8.5E-5 | IPR002110 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 409 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 389 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07270.1 | XB3 ortholog 3 in Arabidopsis thaliana. | 0 |
| RefSeq | XP_025813714.1 | probable E3 ubiquitin-protein ligase XBOS36 [Panicum hallii] | 0 |
| Q4JHE0 | Probable E3 ubiquitin-protein ligase XBOS36 OS=Oryza sativa subsp. japonica OX=39947 GN=XBOS36 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TPX7 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_46564 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology