Basic Information
Locus ID:
Zma_g30923
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Ubiquitin carboxyl-terminal hydrolase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr19 | 19444216 | 19449459 | - | Zma_g30923 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 113,287.98 Da | 46.49 | 67.22 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02661 | Peptidase_C19E | 183 | 489 | 2.93153E-160 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 184 | 488 | 1.3E-41 | IPR001394 |
| Pfam | PF01753 | MYND finger | 87 | 124 | 1.4E-9 | IPR002893 |
| SUPERFAMILY | SSF144232 | HIT/MYND zinc finger-like | 84 | 128 | 2.62E-11 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 183 | 490 | 1.47E-85 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 181 | 496 | 6.8E-90 | - |
| Gene3D | G3DSA:6.10.140.2220 | - | 72 | 130 | 3.9E-13 | - |
| ProSiteProfiles | PS50865 | Zinc finger MYND-type profile. | 87 | 124 | 12.423667 | IPR002893 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 184 | 491 | 49.187199 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 185 | 200 | - | IPR018200 |
| ProSitePatterns | PS01360 | Zinc finger MYND-type signature. | 87 | 124 | - | IPR002893 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 829 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24640.1 | ubiquitin-specific protease 19. | 0 |
| RefSeq | XP_034589899.1 | ubiquitin carboxyl-terminal hydrolase 19-like [Setaria viridis] | 0 |
| Q9SJA1 | Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana OX=3702 GN=UBP19 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9TBL9 | MYND-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41792 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology