Basic Information
Locus ID:
Zma_g30791
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr19 | 18569072 | 18571043 | + | Zma_g30791 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.13 | 66,204.16 Da | 42.79 | 103.62 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 202 | 225 | 0.0024 | IPR001611 |
| Pfam | PF00646 | F-box domain | 55 | 95 | 0.0054 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 47 | 90 | 2.13E-5 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 282 | 409 | 7.06E-7 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 170 | 626 | 2.62E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 434 | 630 | 6.4E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 136 | 242 | 7.8E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 243 | 433 | 2.2E-29 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 147 | 175 | 460.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 202 | 227 | 2.5E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 520 | 545 | 0.0021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 440 | 465 | 4.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 334 | 359 | 11.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 228 | 253 | 1.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 176 | 201 | 0.036 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 386 | 411 | 590.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 466 | 491 | 0.23 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 360 | 385 | 0.022 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 546 | 570 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 572 | 597 | 370.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 493 | 518 | 24.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 254 | 279 | 3.7 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_004965933.1 | EIN3-binding F-box protein 1 [Setaria italica] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology