Basic Information
Locus ID:
Zma_g30685
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
HEI10
Description:
E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr19 | 17721749 | 17723691 | + | Zma_g30685 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 34,181.06 Da | 58.57 | 66.01 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14634 | zinc-RING finger domain | 2 | 43 | 2.7E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 2 | 50 | 6.82E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 53 | 6.6E-7 | IPR013083 |
| Gene3D | G3DSA:1.20.5.1000 | arf6 gtpase in complex with a specific effector, jip4 | 131 | 188 | 8.1E-7 | - |
| Coils | Coil | Coil | 126 | 181 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53490.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_025812029.1 | E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Panicum hallii] | 0 |
| I6PL68 | E3 ubiquitin-protein ligase CCNB1IP1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=HEI10 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9T9A9 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_41207 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg19159, jg21203, jg38228 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_7569 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah007597 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g084980 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19091, Sbi_jg37516 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg5358 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00016077 |
| Amaranthaceae | Suaeda glauca | 6 | Sgl20568, Sgl20569, Sgl21934, Sgl25952, Sgl27210, Sgl27219 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000008559, gene:ENSEOMG00000028153 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0017180 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30163080 |
| Apiaceae | Apium graveolens | 3 | Ag10G02407, Ag11G03196, Ag11G03197 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G002290 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103708674, gene-LOC103710260 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_01.1394.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri3G16677 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G53490.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10011691m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp1g40020.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB04g055870.2N, BniB04g055880.2N, BniB06g027200.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq01G0899 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl01G1023 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g11050 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0028s00038.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate02g23410 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-9272 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG05.1385 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00009430, Pov_00013582 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb7G34962 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.1976, BH06.1812, CH06.2000 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_2AG0107130, gene-QOZ80_2BG0160750 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0580750.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_021834 |
| Poaceae | Oryza coarctata | 2 | Oco03G006280, Oco04G006490 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g13810.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_04G096400, gene-BS78_10G162700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0206378 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr06G032280, Chr0G014340, Chr10G016220, Chr11G006180 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G927500, Tel6E01G376300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG029580, gene_TRIDC6BG034410 |
| Poaceae | Triticum aestivum | 3 | TraesCS6B02G220900.2, TraesCS6D02G182400.2 ... |
| Poaceae | Zea mays | 6 | Zm00001eb164550_P001, Zm00001eb239370_P002 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10246, nbis-gene-34248 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g15429, Zma_g30685 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG09.1107 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g17600 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_5_RagTag.136 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-11107 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1737 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-10651 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013969 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-9104 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-15326 |
| Salicaceae | Populus euphratica | 3 | populus_peu00755, populus_peu17720, populus_peu17729 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132606080, gene-LOC132609254, gene-LOC132636393 |
| Solanaceae | Solanum chilense | 1 | SOLCI000218800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107027333 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7756 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G0050 |
| Zosteraceae | Zostera marina | 1 | Zosma06g00010.v3.1 |