Basic Information
Locus ID:
Zma_g30509
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
TFIIS helical bundle-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr19 | 16564984 | 16570385 | + | Zma_g30509 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.36 | 110,115.44 Da | 48.68 | 78.83 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00183 | TFIIS_I | 709 | 765 | 3.05547E-14 | - |
| Pfam | PF00646 | F-box domain | 18 | 57 | 8.0E-11 | IPR001810 |
| Pfam | PF08711 | TFIIS helical bundle-like domain | 715 | 763 | 7.9E-10 | IPR017923 |
| Pfam | PF08268 | F-box associated domain | 216 | 315 | 4.5E-7 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 69 | 1.7E-15 | IPR036047 |
| SUPERFAMILY | SSF50965 | Galactose oxidase, central domain | 121 | 331 | 1.83E-5 | IPR011043 |
| SUPERFAMILY | SSF47676 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 669 | 772 | 2.09E-18 | IPR035441 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 59 | 1.6E-11 | - |
| Gene3D | G3DSA:1.20.930.10 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 630 | 768 | 1.3E-24 | IPR035441 |
| SMART | SM00509 | TFS2_5 | 687 | 766 | 3.7E-19 | IPR003617 |
| SMART | SM00256 | fbox_2 | 21 | 61 | 1.9E-8 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 111 | 332 | 2.4E-31 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 15 | 61 | 11.511044 | IPR001810 |
| ProSiteProfiles | PS51319 | TFIIS N-terminal domain profile. | 688 | 767 | 21.823761 | IPR017923 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 858 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 885 | 900 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 882 | 918 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 794 | 823 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 579 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 563 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 837 | 852 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G48050.1 | BAH domain ;TFIIS helical bundle-like domain. | 0 |
| RefSeq | XP_021308736.1 | F-box protein At3g07870-like isoform X2 [Sorghum bicolor] | 0 |
| Q9SU30 | F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9TFG6 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_43446 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology