HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Zma_g30281
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: Inactive receptor kinase
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr19 14713234 14715198 - Zma_g30281
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.85 69,056.62 Da 50.80 94.23 -0.05
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00069 Protein kinase domain 363 627 4.2E-24 IPR000719
Pfam PF13855 Leucine rich repeat 146 202 1.4E-6 IPR001611
Pfam PF08263 Leucine rich repeat N-terminal domain 33 68 1.7E-7 IPR013210
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 364 628 6.7E-43 IPR011009
SUPERFAMILY SSF52058 L domain-like 42 215 1.1E-33 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 437 652 3.4E-36 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 327 435 2.9E-13 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 33 231 3.4E-43 IPR032675
ProSiteProfiles PS50011 Protein kinase domain profile. 360 635 25.658169 IPR000719
MobiDBLite mobidb-lite consensus disorder prediction 302 341 - -
MobiDBLite mobidb-lite consensus disorder prediction 638 654 - -
MobiDBLite mobidb-lite consensus disorder prediction 235 263 - -
MobiDBLite mobidb-lite consensus disorder prediction 634 654 - -
MobiDBLite mobidb-lite consensus disorder prediction 235 253 - -
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G17840.1 receptor-like kinase 902. Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown. 0
RefSeq XP_039795126.1 probable inactive receptor kinase RLK902 [Panicum virgatum] 0
Swiss-Prot Q9LVI6 Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana OX=3702 GN=RLK902 PE=1 SV=1 0
TrEMBL A0A3L6T9V9 Protein kinase domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM03G34020 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH08.1596, BH08.1364, CH08.1788
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_6AG0534630, gene-QOZ80_6BG0487820 ...
gene-QOZ80_8AG0631340, gene-QOZ80_8BG0660280
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.5HG0479040.1.CDS1 ...
HORVU.MOREX.r3.7HG0672430.1
Poaceae Lolium multiflorum 3 gene-QYE76_004997, gene-QYE76_018052, gene-QYE76_031967
Poaceae Oryza coarctata 4 Oco15G008650, Oco17G004370, Oco18G004330, Oco18G004340
Poaceae Oryza sativa 4 LOC_Os06g07590.1, LOC_Os08g33090.1, LOC_Os09g23570.1 ...
LOC_Os11g06540.1
Poaceae Paspalum vaginatum 2 gene-BS78_02G177300, gene-BS78_07G139800
Poaceae Puccinellia tenuiflora 2 Pt_Chr0403242, Pt_Chr0702281
Poaceae Sporobolus alterniflorus 5 Chr10G010480, Chr11G011870, Chr17G013590, Chr20G005860 ...
Chr29G005620
Poaceae Thinopyrum elongatum 2 Tel5E01G341500, Tel7E01G388200
Poaceae Triticum dicoccoides 4 gene_TRIDC5AG033120, gene_TRIDC5BG034800 ...
gene_TRIDC7AG027070, gene_TRIDC7BG017590
Poaceae Triticum aestivum 6 TraesCS5A02G205500.1.cds1, TraesCS5B02G202900.1.cds1 ...
TraesCS5D02G210800.1.cds1, TraesCS7A02G214300.1, TraesCS7B02G121600.1, TraesCS7D02G216400.1
Poaceae Zea mays 3 Zm00001eb041870_P001, Zm00001eb179320_P001 ...
Zm00001eb312100_P001
Poaceae Zoysia japonica 4 nbis-gene-16959, nbis-gene-19993, nbis-gene-30896 ...
nbis-gene-45124
Poaceae Zoysia macrostachya 4 Zma_g23013, Zma_g24081, Zma_g30281, Zma_g32444
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.