Basic Information
Locus ID:
Zma_g30120
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr19 | 13415278 | 13418292 | + | Zma_g30120 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 28,581.18 Da | 49.23 | 67.39 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 19 | 252 | 1.6E-82 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 135 | 242 | 6.67E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 137 | 255 | 8.2E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 141 | 243 | 24.528 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 100 | - | - |
| Coils | Coil | Coil | 71 | 105 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_002438435.1 | auxin-responsive protein IAA21 isoform X1 [Sorghum bicolor] | 0 |
| Q5Z749 | Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA21 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TCF0 | Auxin-responsive protein OS=Eragrostis curvula OX=38414 GN=EJB05_42440 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology