HalophFGD

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Basic Information
Locus ID: Zma_g29880
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: Wall-associated receptor kinase galacturonan-binding
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr19 11211850 11212455 - Zma_g29880
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.21 20,766.21 Da 46.66 75.32 0.14
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF13947 Wall-associated receptor kinase galacturonan-binding 32 92 1.4E-14 IPR025287
Gene Ontology
Molecular Function:
GO:0030247 (polysaccharide binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G21210.1 wall associated kinase 4. cell wall-associated ser/thr kinase involved in cell elongation and lateral root development 0
RefSeq XP_039778131.1 wall-associated receptor kinase-like 6 [Panicum virgatum] 0
Swiss-Prot Q9LMN6 Wall-associated receptor kinase 4 OS=Arabidopsis thaliana OX=3702 GN=WAK4 PE=2 SV=1 0
TrEMBL A0A5J9SHP5 GUB_WAK_bind domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_55909 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Eleusine coracana subsp. coracana 4 gene-QOZ80_6AG0525960, gene-QOZ80_6AG0525980 ...
gene-QOZ80_6AG0527170, gene-QOZ80_6BG0481050
Poaceae Hordeum vulgare 1 HORVU.MOREX.r3.5HG0525250.1
Poaceae Sporobolus alterniflorus 1 Chr14G008760
Poaceae Triticum dicoccoides 1 gene_TRIDC7AG078570
Poaceae Zoysia japonica 5 nbis-gene-31881, nbis-gene-31882, nbis-gene-50705 ...
nbis-gene-55137, nbis-gene-59214
Poaceae Zoysia macrostachya 3 Zma_g29880, Zma_g32067, Zma_g32068
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.