Basic Information
Locus ID:
Zma_g2955
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr02 | 3919867 | 3922686 | - | Zma_g2955 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 60,001.16 Da | 53.24 | 69.61 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 267 | 291 | 8.0E-7 | IPR001876 |
| Pfam | PF00641 | Zn-finger in Ran binding protein and others | 311 | 334 | 1.5E-6 | IPR001876 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 260 | 292 | 1.1E-5 | IPR036443 |
| SUPERFAMILY | SSF90209 | Ran binding protein zinc finger-like | 306 | 337 | 1.18E-5 | IPR036443 |
| Gene3D | G3DSA:4.10.1060.10 | - | 341 | 373 | 1.5E-7 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 303 | 340 | 1.6E-12 | - |
| Gene3D | G3DSA:4.10.1060.10 | - | 258 | 295 | 6.6E-13 | - |
| SMART | SM00547 | zf_4 | 269 | 293 | 3.3E-7 | IPR001876 |
| SMART | SM00547 | zf_4 | 346 | 370 | 0.03 | IPR001876 |
| SMART | SM00547 | zf_4 | 313 | 337 | 1.7E-6 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 311 | 340 | 9.393621 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 267 | 296 | 9.969523 | IPR001876 |
| ProSiteProfiles | PS50199 | Zinc finger RanBP2 type profile. | 344 | 373 | 9.009686 | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 348 | 367 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 271 | 290 | - | IPR001876 |
| ProSitePatterns | PS01358 | Zinc finger RanBP2-type signature. | 315 | 334 | - | IPR001876 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 409 | 429 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 458 | 531 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 468 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 516 | 531 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G70650.1 | Ran BP2/NZF zinc finger-like superfamily protein. | 0 |
| RefSeq | XP_002466578.2 | uncharacterized protein LOC8063385 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9WBQ3 | Zinc finger protein VAR3, chloroplastic (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04898 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology