Basic Information
Locus ID:
Zma_g29506
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr19 | 3925774 | 3927102 | + | Zma_g29506 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 44,744.04 Da | 51.53 | 88.33 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 228 | 335 | 1.4E-13 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 42 | 139 | 2.1E-4 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 183 | 335 | 3.66E-18 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 37 | 152 | 4.32E-12 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 195 | 336 | 9.8E-13 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 31 | 179 | 4.4E-8 | IPR036378 |
| SMART | SM00554 | fasc_3 | 231 | 336 | 2.7E-16 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 191 | 333 | 12.976023 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 31 | 178 | 9.395277 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 405 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 345 | 429 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55730.1 | FASCICLIN-like arabinogalactan 1. fasciclin-like arabinogalactan-protein 1 (Fla1) | 0 |
| RefSeq | XP_025813093.1 | fasciclin-like arabinogalactan protein 1 [Panicum hallii] | 0 |
| Q9FM65 | Fasciclin-like arabinogalactan protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6PFQ1 | Fasciclin-like arabinogalactan protein 1 OS=Panicum miliaceum OX=4540 GN=C2845_PM10G10550 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology