HalophFGD

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Basic Information
Locus ID: Zma_g29492
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr19 3782571 3784004 + Zma_g29492
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.59 53,853.50 Da 65.36 75.53 -0.38
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 113 148 5.3E-6 IPR001810
Pfam PF03478 Protein of unknown function (DUF295) 388 449 5.1E-9 IPR005174
SUPERFAMILY SSF81383 F-box domain 109 153 1.11E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 114 155 9.2E-9 -
MobiDBLite mobidb-lite consensus disorder prediction 1 34 - -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_025827500.1 uncharacterized protein LOC112902591 [Panicum hallii] 0
TrEMBL A0A2S3ICJ7 DUF295 domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_8G036900 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Asparagaceae Asparagus officinalis 1 AsparagusV1_06.303.V1.1
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno06g06340
Poaceae Echinochloa crus-galli 62 AH01.2961, AH01.2962, AH03.2991, AH03.2992, AH03.3030 ...
AH04.1576, AH05.1260, AH05.2628, AH05.2629, AH06.1134, AH06.251, AH08.1288, AH08.1298, AH08.1299, BH03.3160, BH03.3161, BH04.1588, BH04.1926, BH04.1933, BH04.1984, BH05.1435, BH05.2714, BH06.1163, BH06.354, BH06.357, BH06.466, BH06.496, BH06.500, BH07.1563, BH07.555, BH08.1269, BH08.1273, BH08.1282, BH08.1283, BH08.1285, BH08.1462, BH08.202, BH08.203, CH01.3529, CH01.4766, CH02.2378, CH02.2921, CH03.3352, CH03.3353, CH03.3356, CH03.3400, CH03.3401, CH04.1395, CH04.1816, CH04.2264, CH05.1623, CH06.1289, CH06.345, CH06.347, CH06.349, CH07.2334, CH08.1391, CH08.1395, CH08.1396, CH08.1695, CH08.245, Contig942_2.4
Poaceae Eleusine coracana subsp. coracana 42 gene-QOZ80_1AG0008090, gene-QOZ80_1BG0056840 ...
gene-QOZ80_2AG0102190, gene-QOZ80_2AG0125690, gene-QOZ80_2AG0131900, gene-QOZ80_2BG0155550, gene-QOZ80_2BG0181430, gene-QOZ80_2BG0187360, gene-QOZ80_4AG0318260, gene-QOZ80_5AG0379330, gene-QOZ80_5AG0379340, gene-QOZ80_5AG0408020, gene-QOZ80_5BG0426350, gene-QOZ80_5BG0426360, gene-QOZ80_5BG0456320, gene-QOZ80_6BG0468750, gene-QOZ80_7AG0567180, gene-QOZ80_7BG0599050, gene-QOZ80_8AG0627680, gene-QOZ80_8AG0627730, gene-QOZ80_8BG0656360, gene-QOZ80_8BG0656440, gene-QOZ80_9AG0672650, gene-QOZ80_9AG0680860, gene-QOZ80_9AG0688340, gene-QOZ80_9AG0688350, gene-QOZ80_9AG0688360, gene-QOZ80_9AG0688450, gene-QOZ80_9AG0688470, gene-QOZ80_9AG0688500, gene-QOZ80_9AG0688510, gene-QOZ80_9AG0689230, gene-QOZ80_9AG0689990, gene-QOZ80_9BG0696260, gene-QOZ80_9BG0698850, gene-QOZ80_9BG0714830, gene-QOZ80_9BG0716650, gene-QOZ80_9BG0716660, gene-QOZ80_9BG0716710, gene-QOZ80_9BG0716720, gene-QOZ80_9BG0716730, gene-QOZ80_9BG0716740
Poaceae Hordeum vulgare 14 HORVU.MOREX.r3.1HG0013960.1.CDS1 ...
HORVU.MOREX.r3.1HG0088350.1.CDS1, HORVU.MOREX.r3.1HG0088370.1.CDS1, HORVU.MOREX.r3.1HG0088410.1.CDS1, HORVU.MOREX.r3.1HG0091090.1.CDS1, HORVU.MOREX.r3.2HG0121790.1.CDS1, HORVU.MOREX.r3.3HG0233570.1.CDS1, HORVU.MOREX.r3.3HG0290980.1.CDS1, HORVU.MOREX.r3.4HG0341240.1.CDS1, HORVU.MOREX.r3.4HG0392220.1.CDS1, HORVU.MOREX.r3.7HG0650240.1.CDS1, HORVU.MOREX.r3.7HG0739250.1.CDS1, HORVU.MOREX.r3.7HG0748200.1, HORVU.MOREX.r3.7HG0751100.1.CDS1
Poaceae Lolium multiflorum 43 gene-QYE76_001105, gene-QYE76_002874, gene-QYE76_004422 ...
gene-QYE76_006338, gene-QYE76_006339, gene-QYE76_009128, gene-QYE76_015424, gene-QYE76_015455, gene-QYE76_015458, gene-QYE76_015460, gene-QYE76_017209, gene-QYE76_017733, gene-QYE76_024147, gene-QYE76_027874, gene-QYE76_027875, gene-QYE76_027877, gene-QYE76_027879, gene-QYE76_027880, gene-QYE76_027885, gene-QYE76_027886, gene-QYE76_027890, gene-QYE76_027891, gene-QYE76_027892, gene-QYE76_028860, gene-QYE76_029151, gene-QYE76_036415, gene-QYE76_037416, gene-QYE76_044045, gene-QYE76_048574, gene-QYE76_048593, gene-QYE76_048597, gene-QYE76_057062, gene-QYE76_057456, gene-QYE76_060961, gene-QYE76_061723, gene-QYE76_063929, gene-QYE76_063930, gene-QYE76_065879, gene-QYE76_065882, gene-QYE76_065906, gene-QYE76_065907, gene-QYE76_068439, gene-QYE76_071793
Poaceae Oryza coarctata 20 Oco01G011840, Oco02G012080, Oco02G023020, Oco03G002810 ...
Oco03G002880, Oco03G019200, Oco04G002800, Oco04G019970, Oco09G007730, Oco11G002280, Oco12G002270, Oco21G001360, Oco21G008040, Oco22G009230, Oco22G009930, Oco22G009940, Oco22G010060, Oco23G002050, Oco23G009450, Oco24G009160
Poaceae Oryza sativa 22 LOC_Os02g03660.1, LOC_Os02g06470.1, LOC_Os02g47490.1 ...
LOC_Os06g05560.1, LOC_Os06g05580.1, LOC_Os06g05590.1, LOC_Os06g05600.1, LOC_Os06g05610.1, LOC_Os06g05620.1, LOC_Os06g20420.1, LOC_Os07g04790.1, LOC_Os08g31690.1, LOC_Os11g05580.1, LOC_Os11g05590.1, LOC_Os11g40790.1, LOC_Os11g40800.1, LOC_Os12g05960.1, LOC_Os12g05970.1, LOC_Os12g39460.1, LOC_Os12g39520.1, LOC_Os12g40140.1, LOC_Os12g40290.1
Poaceae Paspalum vaginatum 25 gene-BS78_02G278400, gene-BS78_03G305100, gene-BS78_K091100 ...
gene-BS78_04G238400, gene-BS78_05G015800, gene-BS78_05G015900, gene-BS78_05G016300, gene-BS78_05G016500, gene-BS78_05G016700, gene-BS78_05G016900, gene-BS78_05G209200, gene-BS78_06G023500, gene-BS78_06G033200, gene-BS78_07G119900, gene-BS78_07G210400, gene-BS78_07G230800, gene-BS78_10G041800, gene-BS78_10G041900, gene-BS78_10G042000, gene-BS78_10G042100, gene-BS78_10G042200, gene-BS78_10G042400, gene-BS78_10G052100, gene-BS78_10G056000, gene-BS78_10G099600
Poaceae Puccinellia tenuiflora 19 Pt_Chr0101782, Pt_Chr0200394, Pt_Chr0201388, Pt_Chr0204406 ...
Pt_Chr0204407, Pt_Chr0204408, Pt_Chr0205964, Pt_Chr0205965, Pt_Chr0206830, Pt_Chr0306919, Pt_Chr0306928, Pt_Chr0402206, Pt_Chr0402208, Pt_Chr0504565, Pt_Chr0605590, Pt_Chr0700834, Pt_Chr0702111, Pt_Chr0702129, Pt_Ctg00241
Poaceae Sporobolus alterniflorus 17 Chr04G021030, Chr04G021040, Chr06G022640, Chr06G022650 ...
Chr11G022960, Chr16G004930, Chr16G015360, Chr17G004370, Chr20G007700, Chr24G007440, Chr24G007980, Chr28G007330, Chr28G007340, Chr29G007120, Chr29G007140, Chr31G001130, Chr31G004450
Poaceae Thinopyrum elongatum 30 Tel1E01G080200, Tel1E01G650900, Tel1E01G651000 ...
Tel1E01G651100, Tel1E01G651200, Tel1E01G651300, Tel1E01G651400, Tel1E01G651600, Tel1E01G651700, Tel1E01G651800, Tel1E01G653100, Tel1E01G655000, Tel1E01G655100, Tel1E01G686400, Tel2E01G589100, Tel3E01G145300, Tel3E01G489200, Tel6E01G188000, Tel7E01G195700, Tel7E01G197700, Tel7E01G198000, Tel7E01G199900, Tel7E01G200000, Tel7E01G200400, Tel7E01G200900, Tel7E01G201300, Tel7E01G344800, Tel7E01G345000, Tel7E01G345100, Tel7E01G384700
Poaceae Triticum dicoccoides 21 gene_TRIDC1AG058710, gene_TRIDC1AG058730 ...
gene_TRIDC1AG058770, gene_TRIDC1AG058780, gene_TRIDC1AG058840, gene_TRIDC1BG067580, gene_TRIDC1BG067600, gene_TRIDC1BG067610, gene_TRIDC1BG067630, gene_TRIDC1BG067640, gene_TRIDC1BG067660, gene_TRIDC1BG067740, gene_TRIDC3AG044370, gene_TRIDC3BG050280, gene_TRIDC4AG057300, gene_TRIDC4AG057470, gene_TRIDC4AG057610, gene_TRIDC4BG010960, gene_TRIDC6BG050920, gene_TRIDC7BG013690, gene_TRIDC7BG074230
Poaceae Triticum aestivum 99 TraesCS1A02G036800.1, TraesCS1A02G398500.1 ...
TraesCS1A02G398600.1, TraesCS1A02G398900.1, TraesCS1A02G399000.1, TraesCS1A02G399100.1.cds1, TraesCS1A02G399200.1.cds1, TraesCS1A02G399300.1, TraesCS1A02G414800.1.cds1, TraesCS1B02G082800.1.cds1, TraesCS1B02G426400.1, TraesCS1B02G426500.1.cds1, TraesCS1B02G426600.1.cds1, TraesCS1B02G426700.1, TraesCS1B02G426800.1.cds1, TraesCS1B02G426900.1.cds1, TraesCS1B02G427000.1.cds1, TraesCS1B02G427100.1.cds1, TraesCS1B02G427200.1.cds1, TraesCS1B02G427300.1.cds1, TraesCS1B02G428100.1.cds1, TraesCS1B02G444800.1.cds1, TraesCS1D02G038400.1, TraesCS1D02G038500.1.cds1, TraesCS1D02G038600.1, TraesCS1D02G038700.1, TraesCS1D02G068200.1.cds1, TraesCS1D02G294100.1.cds1, TraesCS1D02G294200.1.cds1, TraesCS1D02G406100.1.cds1, TraesCS1D02G406200.1.cds1, TraesCS1D02G406300.1, TraesCS1D02G406400.1.cds1, TraesCS1D02G406500.1.cds1, TraesCS1D02G406600.1.cds1, TraesCS1D02G406700.1, TraesCS1D02G406800.1.cds1, TraesCS1D02G407700.1.cds1, TraesCS1D02G422200.1, TraesCS1D02G422500.1.cds1, TraesCS2A02G154200.1.cds1, TraesCS2B02G357000.1.cds1, TraesCS2B02G391300.1.cds1, TraesCS2B02G413700.1.cds1, TraesCS2D02G159700.1, TraesCS2D02G393300.1.cds1, TraesCS3A02G090800.1, TraesCS3B02G046600.1, TraesCS3B02G095800.1.cds1, TraesCS3B02G105800.1, TraesCS3B02G334000.1.cds1, TraesCS3D02G042400.1.cds1, TraesCS3D02G090800.1.cds1, TraesCS3D02G299400.1.cds1, TraesCS4A02G395200.1.cds1, TraesCS4A02G395300.1.cds1, TraesCS4A02G396000.1.cds1, TraesCS4A02G396100.1.cds1, TraesCS4A02G397100.1, TraesCS4A02G397200.1.cds1, TraesCS4A02G397300.1, TraesCS4A02G397600.1, TraesCS4A02G398000.1, TraesCS4A02G398200.1, TraesCS4B02G100200.1.cds1, TraesCS4D02G070100.1.cds1, TraesCS6A02G024800.1.cds1, TraesCS6B02G114500.1, TraesCS6B02G312400.1.cds1, TraesCS6D02G076300.1, TraesCS7A02G096000.1.cds1, TraesCS7A02G114900.1, TraesCS7A02G186000.1, TraesCS7A02G212400.1.cds1, TraesCS7A02G553400.1, TraesCS7B02G012300.1, TraesCS7B02G090300.1.cds1, TraesCS7B02G092000.1.cds1, TraesCS7B02G092100.1.cds1, TraesCS7B02G485200.1.cds1, TraesCS7D02G091000.1.cds1, TraesCS7D02G091800.1.cds1, TraesCS7D02G091900.1.cds1, TraesCS7D02G092000.1, TraesCS7D02G093300.1, TraesCS7D02G093400.1.cds1, TraesCS7D02G093500.1.cds1, TraesCS7D02G093800.1, TraesCS7D02G093900.1.cds1, TraesCS7D02G094100.1, TraesCS7D02G094200.1, TraesCS7D02G186700.1.cds1, TraesCS7D02G187800.1.cds1, TraesCS7D02G187900.1.cds1, TraesCS7D02G437100.1.cds1, TraesCS7D02G539900.1.cds1, TraesCS7D02G540100.1.cds1, TraesCSU02G228700.1.cds1, TraesCSU02G248000.1.cds1
Poaceae Zoysia japonica 4 nbis-gene-34724, nbis-gene-43222, nbis-gene-50379 ...
nbis-gene-57051
Poaceae Zoysia macrostachya 4 Zma_g22868, Zma_g23978, Zma_g29106, Zma_g29492
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.