Basic Information
Locus ID:
Zma_g28947
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
TPL-binding domain in jasmonate signalling
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr19 | 71953 | 78610 | + | Zma_g28947 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 105,871.79 Da | 55.53 | 77.04 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16135 | Tify domain binding domain | 374 | 429 | 6.5E-15 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 556 | 606 | 4.9E-16 | IPR032308 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 865 | 962 | 3.35E-8 | IPR016181 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 704 | 762 | 3.77E-9 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 614 | 667 | 2.47E-11 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 608 | 699 | 1.2E-12 | IPR013083 |
| Gene3D | G3DSA:3.40.630.30 | - | 859 | 966 | 1.1E-5 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 706 | 767 | 1.3E-12 | IPR013083 |
| SMART | SM00249 | PHD_3 | 622 | 662 | 1.3E-5 | IPR001965 |
| SMART | SM00249 | PHD_3 | 708 | 765 | 2.1E-5 | IPR001965 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 812 | 982 | 9.729692 | IPR000182 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 706 | 767 | 8.5288 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 709 | 764 | - | IPR019786 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 623 | 661 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 61 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27980.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | NP_001336837.1 | uncharacterized protein LOC100274990 [Zea mays] | 0 |
| TrEMBL | A0A5J9SK28 | N-acetyltransferase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55330 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology