Basic Information
Locus ID:
Zma_g28893
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr18 | 13215306 | 13220119 | - | Zma_g28893 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.74 | 93,507.12 Da | 39.71 | 86.11 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 540 | 673 | 1.17408E-23 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 542 | 672 | 4.3E-38 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 695 | 738 | 4.9E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 501 | 741 | 4.91E-60 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 119 | 362 | 3.47E-5 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 674 | 759 | 9.9E-97 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 500 | 760 | 9.9E-97 | IPR027417 |
| SMART | SM00382 | AAA_5 | 538 | 675 | 3.3E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 645 | 664 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 190 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 788 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 734 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 186 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 437 | 464 | - | - |
| Coils | Coil | Coil | 725 | 757 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_004961073.1 | putative cell division cycle ATPase [Setaria italica] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9U955 | AAA domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_36316 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology