Basic Information
Locus ID:
Zma_g28864
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr18 | 13077899 | 13078453 | - | Zma_g28864 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 19,747.11 Da | 36.76 | 85.60 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 112 | 174 | 3.52879E-21 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 35 | 97 | 1.2E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 111 | 173 | 1.1E-15 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 23 | 174 | 3.3E-41 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 4 | 106 | 1.7E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 107 | 179 | 6.0E-24 | - |
| SMART | SM00054 | efh_1 | 112 | 140 | 1.4E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 36 | 64 | 0.011 | IPR002048 |
| SMART | SM00054 | efh_1 | 72 | 100 | 0.024 | IPR002048 |
| SMART | SM00054 | efh_1 | 148 | 176 | 2.5E-7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 68 | 103 | 10.356991 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 32 | 67 | 13.871811 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 144 | 179 | 13.286007 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 108 | 143 | 14.931837 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 121 | 133 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 45 | 57 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 157 | 169 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 81 | 93 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 32 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25600.1 | Calcium-binding EF-hand family protein. | 0 |
| RefSeq | XP_025809538.1 | probable calcium-binding protein CML14 [Panicum hallii] | 0 |
| Q6L5F4 | Probable calcium-binding protein CML14 OS=Oryza sativa subsp. japonica OX=39947 GN=CML14 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9IJR1 | Calcium-binding protein CML14 OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology