Basic Information
Locus ID:
Zma_g28832
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
WD domain, G-beta repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr18 | 12956745 | 12962527 | - | Zma_g28832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 124,516.43 Da | 45.06 | 70.43 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 984 | 1016 | 0.022 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 812 | 1120 | 4.37E-48 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 336 | 610 | 1.14E-13 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 337 | 615 | 2.4E-16 | - |
| Gene3D | G3DSA:2.130.10.10 | - | 785 | 1124 | 1.2E-119 | IPR015943 |
| SMART | SM00320 | WD40_4 | 1085 | 1122 | 12.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 850 | 889 | 0.021 | IPR001680 |
| SMART | SM00320 | WD40_4 | 978 | 1016 | 1.2E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 935 | 974 | 0.0048 | IPR001680 |
| SMART | SM00320 | WD40_4 | 805 | 839 | 230.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 892 | 932 | 9.5E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 1027 | 1066 | 110.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 899 | 941 | 9.40565 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 874 | 898 | 8.770704 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 985 | 1025 | 12.079106 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 985 | 1018 | 9.99469 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 876 | 890 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 1003 | 1017 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 1003 | 1017 | 8.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 919 | 933 | 8.5E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 876 | 890 | 8.5E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 59 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 440 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 413 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 42 | - | - |
| Coils | Coil | Coil | 642 | 676 | - | - |
| Coils | Coil | Coil | 728 | 748 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_025809436.1 | protein SUPPRESSOR OF PHYA-105 1-like [Panicum hallii] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2S3H9G7 | Protein SPA1-RELATED 2 OS=Panicum hallii OX=206008 GN=PAHAL_3G174600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology