Basic Information
Locus ID:
Zma_g28738
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Hemerythrin HHE cation binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr18 | 12463283 | 12472752 | + | Zma_g28738 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 144,276.19 Da | 51.38 | 73.06 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 1155 | 1198 | 1.50958E-18 | - |
| CDD | cd12108 | Hr-like | 86 | 212 | 4.36654E-29 | - |
| CDD | cd12108 | Hr-like | 686 | 845 | 4.04458E-27 | - |
| CDD | cd12108 | Hr-like | 341 | 469 | 4.07489E-18 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 338 | 471 | 1.3E-7 | IPR012312 |
| Pfam | PF13639 | Ring finger domain | 1155 | 1197 | 2.4E-6 | IPR001841 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 89 | 214 | 1.6E-11 | IPR012312 |
| Pfam | PF05495 | CHY zinc finger | 1027 | 1102 | 6.2E-18 | IPR008913 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 684 | 846 | 3.7E-9 | IPR012312 |
| Pfam | PF14599 | Zinc-ribbon | 1203 | 1260 | 4.6E-22 | IPR039512 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1093 | 1148 | 2.09E-15 | IPR037275 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1154 | 1202 | 4.44E-7 | - |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 1021 | 1083 | 1.57E-16 | IPR037274 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 680 | 899 | 2.9E-23 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 81 | 231 | 1.3E-32 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1227 | 1270 | 5.3E-16 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1150 | 1199 | 8.6E-9 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 340 | 487 | 3.7E-16 | - |
| SMART | SM00184 | ring_2 | 1156 | 1197 | 1.8E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1156 | 1197 | 11.161508 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1092 | 1155 | 30.445927 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 1020 | 1089 | 25.022556 | IPR008913 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_004961317.1 | zinc finger protein BRUTUS isoform X2 [Setaria italica] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7EAN8 | Zinc finger protein BRUTUS OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G180100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology