Basic Information
Locus ID:
Zma_g28703
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr18 | 12260369 | 12261091 | + | Zma_g28703 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 22,744.33 Da | 38.03 | 68.86 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 18 | 148 | 1.46342E-47 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 18 | 149 | 1.5E-27 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 7 | 149 | 1.7E-42 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 148 | 8.8E-56 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 18 | 149 | 1.5E-33 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 7 | 149 | 48.347717 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 194 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_039837308.1 | jacalin-related lectin 19-like isoform X2 [Panicum virgatum] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0UYF4 | Jacalin-type lectin domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG284500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology