Basic Information
Locus ID:
Zma_g28397
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr18 | 10141810 | 10146101 | + | Zma_g28397 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.52 | 142,543.31 Da | 43.47 | 65.84 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 247 | 333 | 2.68584E-28 | - |
| Pfam | PF00855 | PWWP domain | 247 | 334 | 3.3E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 243 | 353 | 6.62E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 242 | 340 | 3.9E-24 | - |
| SMART | SM00293 | PWWP_4 | 247 | 308 | 6.0E-10 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 249 | 310 | 15.46652 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 484 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1175 | 1332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 915 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 120 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 836 | 862 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 521 | 540 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1298 | 1313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1246 | 1267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 657 | 676 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 880 | 940 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1227 | 1245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1184 | 1225 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_025806246.1 | uncharacterized protein LOC112884854 [Panicum hallii] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2S3HBA0 | PWWP domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G247900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology