Basic Information
Locus ID:
Zma_g28228
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr18 | 8417522 | 8418715 | + | Zma_g28228 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 41,885.66 Da | 47.14 | 102.90 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 30 | 67 | 2.4E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 123 | 183 | 1.8E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 38 | 369 | 3.91E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 214 | 8.4E-40 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 215 | 372 | 2.6E-22 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_002439784.1 | probable LRR receptor-like serine/threonine-protein kinase IRK [Sorghum bicolor] | 0 |
| TrEMBL | A0A811RXP0 | LRRNT_2 domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS57948 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology