HalophFGD

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Basic Information
Locus ID: Zma_g28150
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr18 7390619 7424829 - Zma_g28150
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.11 47,202.80 Da 60.85 76.84 -0.55
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 171 251 1.07E-9 IPR036047
Gene3D G3DSA:1.20.1280.50 - 160 256 4.6E-7 -
ProSiteProfiles PS50181 F-box domain profile. 173 222 8.83511 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002467378.1 uncharacterized protein LOC8083603 [Sorghum bicolor] 0
TrEMBL A0A5J9U6H0 F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_35332 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 2 BH01.2957, CH01.3154
Poaceae Eleusine coracana subsp. coracana 5 gene-QOZ80_1AG0034520, gene-QOZ80_5AG0375060 ...
gene-QOZ80_5BG0421130, gene-QOZ80_5BG0421180, gene-QOZ80_9AG0679290
Poaceae Paspalum vaginatum 1 gene-BS78_03G194300
Poaceae Sporobolus alterniflorus 6 Chr01G021480, Chr02G008650, Chr05G024830, Chr08G017020 ...
Chr12G016380, Chr22G012560
Poaceae Zea mays 2 Zm00001eb224500_P001, Zm00001eb224510_P001
Poaceae Zoysia japonica 5 nbis-gene-23678, nbis-gene-23679, nbis-gene-23680 ...
nbis-gene-23681, nbis-gene-23684
Poaceae Zoysia macrostachya 2 Zma_g28150, Zma_g28151
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.