Basic Information
Locus ID:
Zma_g27088
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-variant domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr17 | 11325316 | 11327442 | - | Zma_g27088 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.54 | 25,890.45 Da | 43.36 | 70.00 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16495 | RING_CH-C4HC3_MARCH | 124 | 175 | 3.92567E-12 | - |
| Pfam | PF12906 | RING-variant domain | 124 | 175 | 1.1E-10 | IPR011016 |
| SUPERFAMILY | SSF57850 | RING/U-box | 120 | 178 | 5.3E-11 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 110 | 183 | 3.1E-15 | IPR013083 |
| SMART | SM00744 | ringv_2 | 123 | 176 | 1.3E-17 | IPR011016 |
| ProSiteProfiles | PS51292 | Zinc finger RING-CH-type profile. | 116 | 182 | 18.071077 | IPR011016 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G05830.1 | RING/FYVE/PHD zinc finger superfamily protein. | 0 |
| RefSeq | XP_004961898.1 | uncharacterized protein LOC101769852 [Setaria italica] | 0 |
| TrEMBL | A0A1E5WFS8 | RING-CH-type domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0002971 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology