Basic Information
Locus ID:
Zma_g27047
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr17 | 10932820 | 10941349 | + | Zma_g27047 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 167,627.38 Da | 49.64 | 87.64 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1126 | 1516 | 9.92093E-110 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1172 | 1518 | 9.5E-80 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 122 | 545 | 1.48E-33 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1121 | 1511 | 9.68E-95 | IPR035983 |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1073 | 1289 | 3.5E-37 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 110 | 554 | 3.6E-45 | IPR011989 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1400 | 1516 | 1.1E-33 | - |
| SMART | SM00119 | hect_3 | 1136 | 1518 | 2.4E-95 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1152 | 1518 | 62.055119 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 72 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 79 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 854 | 886 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 826 | 886 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_039837940.1 | E3 ubiquitin-protein ligase UPL4-like [Panicum virgatum] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9U7X4 | HECT-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_35894 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology