Basic Information
Locus ID:
Zma_g26746
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Ribosome inactivating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr17 | 8484989 | 8485864 | + | Zma_g26746 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 32,752.07 Da | 44.60 | 92.13 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00161 | Ribosome inactivating protein | 16 | 205 | 2.8E-34 | IPR001574 |
| SUPERFAMILY | SSF56371 | Ribosome inactivating proteins (RIP) | 9 | 217 | 3.41E-40 | IPR036041 |
| Gene3D | G3DSA:3.40.420.10 | Ricin (A subunit), domain 1 | 1 | 166 | 1.1E-33 | IPR016138 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 125 | 139 | 5.5E-11 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 16 | 29 | 5.5E-11 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 191 | 208 | 5.5E-11 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 69 | 84 | 5.5E-11 | IPR017989 |
| PRINTS | PR00396 | Ribosome inactivating protein family signature | 156 | 176 | 5.5E-11 | IPR017989 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_044432913.1 | protein synthesis inhibitor II-like [Triticum aestivum] | 0 |
| P04399 | Protein synthesis inhibitor II OS=Hordeum vulgare OX=4513 GN=RIP30A PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7EEH8 | rRNA N-glycosylase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G291500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology