Basic Information
Locus ID:
Zma_g26540
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr17 | 3602462 | 3605031 | + | Zma_g26540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 62,551.38 Da | 40.71 | 88.46 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 34 | 69 | 5.7E-5 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 32 | 80 | 1.44E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 166 | 480 | 4.94E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 27 | 99 | 1.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 142 | 269 | 6.8E-8 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 328 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13960.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_052164573.1 | uncharacterized protein LOC127781626 [Oryza glaberrima] | 0 |
| Q9LV26 | Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana OX=3702 GN=At3g18150 PE=4 SV=2 | 0 | |
| TrEMBL | A0A5J9U0K4 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_33206 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology