Basic Information
Locus ID:
Zma_g26408
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the leguminous lectin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr17 | 1820896 | 1821573 | - | Zma_g26408 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 24,171.07 Da | 44.05 | 86.67 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00139 | Legume lectin domain | 33 | 215 | 1.9E-37 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 33 | 224 | 1.03E-43 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 30 | 215 | 3.8E-44 | - |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 149 | 155 | - | IPR019825 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039851875.1 | L-type lectin-domain containing receptor kinase IX.2-like [Panicum virgatum] | 0 |
| TrEMBL | A0A5J9TJC1 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_45058 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH02.4399, CH02.4447, CH04.698 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1AG0044910, gene-QOZ80_6BG0472060 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0103660.1, HORVU.MOREX.r3.3HG0325350.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_033622, gene-QYE76_033626, gene-QYE76_038280 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os08g24670.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_05G182600 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr02G033140, Chr05G000710 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G130100, Tel2E01G132800 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC2AG006430 |
| Poaceae | Triticum aestivum | 8 | TraesCS2A02G055200.1, TraesCS2A02G057000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb142870_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52831 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g26408 |