Basic Information
Locus ID:
Zma_g26333
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
UPL4
Description:
Domain Homologous to E6-AP Carboxyl Terminus with
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr17 | 1130764 | 1137208 | + | Zma_g26333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.43 | 150,675.81 Da | 44.29 | 94.53 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 966 | 1348 | 8.79485E-103 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1011 | 1350 | 1.1E-77 | IPR000569 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 955 | 1343 | 1.96E-88 | IPR035983 |
| SUPERFAMILY | SSF48371 | ARM repeat | 70 | 435 | 5.35E-22 | IPR016024 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1236 | 1347 | 2.8E-29 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 966 | 1229 | 2.2E-36 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 26 | 445 | 3.9E-29 | IPR011989 |
| Gene3D | G3DSA:3.30.2160.10 | Hect, E3 ligase catalytic domain | 1096 | 1194 | 2.2E-36 | - |
| SMART | SM00119 | hect_3 | 973 | 1350 | 1.1E-84 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 990 | 1350 | 58.768963 | IPR000569 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02880.1 | ubiquitin-protein ligase 4. encodes a ubiquitin-protein ligase containing a HECT domain. There are six other HECT-domain UPLs in Arabidopsis. | 0 |
| RefSeq | XP_034584351.1 | E3 ubiquitin-protein ligase UPL4-like isoform X1 [Setaria viridis] | 0 |
| Q9LYZ7 | E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana OX=3702 GN=UPL4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A5J9U3U7 | HECT-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_34190 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology