Basic Information
Locus ID:
Zma_g26086
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
IAA2
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr16 | 9619178 | 9620055 | + | Zma_g26086 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 25,114.89 Da | 41.95 | 63.74 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 61 | 233 | 1.7E-59 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 132 | 225 | 1.67E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 131 | 237 | 5.6E-38 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 136 | 226 | 25.564875 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 123 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 124 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23050.1 | indole-3-acetic acid 7. Transcription regulator acting as repressor of auxin-inducible gene expression. Plays role in the control of gravitropic growth and development in light-grown seedlings. Auxin induces the degradation of the protein in a dosage-dependent manner in a process mediated by AtRac1. Auxin induced the relocalization of the protein within the nucleus from a diffused nucleoplasmic pattern to a discrete particulated pattern named nuclear protein bodies or NPB in a process also mediated by Rac1. Colocalizes with SCF, CSN and 26S proteasome components. | 0 |
| RefSeq | XP_025807550.1 | auxin-responsive protein IAA31-like [Panicum hallii] | 0 |
| P0C133 | Auxin-responsive protein IAA31 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA31 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5W1B4 | Auxin-responsive protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0007797 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology