Basic Information
Locus ID:
Zma_g26007
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
RING-type E3 ubiquitin transferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr16 | 8902180 | 8907811 | - | Zma_g26007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 74,254.01 Da | 49.51 | 93.19 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16664 | RING-Ubox_PUB | 264 | 306 | 9.60387E-28 | - |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 386 | 424 | 3.1E-10 | IPR000225 |
| Pfam | PF00514 | Armadillo/beta-catenin-like repeat | 469 | 506 | 4.0E-6 | IPR000225 |
| Pfam | PF04564 | U-box domain | 260 | 330 | 6.9E-22 | IPR003613 |
| SUPERFAMILY | SSF48371 | ARM repeat | 355 | 642 | 2.56E-50 | IPR016024 |
| SUPERFAMILY | SSF57850 | RING/U-box | 249 | 335 | 1.19E-30 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 33 | 127 | 8.2E-7 | IPR036537 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 259 | 333 | 5.6E-31 | IPR013083 |
| Gene3D | G3DSA:1.25.10.10 | - | 352 | 633 | 8.4E-50 | IPR011989 |
| SMART | SM00185 | arm_5 | 467 | 507 | 3.4 | IPR000225 |
| SMART | SM00185 | arm_5 | 426 | 466 | 0.33 | IPR000225 |
| SMART | SM00185 | arm_5 | 385 | 425 | 8.9E-6 | IPR000225 |
| SMART | SM00504 | Ubox_2 | 263 | 326 | 1.9E-33 | IPR003613 |
| SMART | SM00185 | arm_5 | 549 | 589 | 470.0 | IPR000225 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 259 | 333 | 44.796391 | IPR003613 |
| ProSiteProfiles | PS50176 | Armadillo/plakoglobin ARM repeat profile. | 396 | 438 | 13.212399 | IPR000225 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 680 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 658 | - | - |
| Coils | Coil | Coil | 132 | 152 | - | - |
| Coils | Coil | Coil | 54 | 74 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46510.1 | plant U-box 13. Encodes a protein containing a UND, a U-box, and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. Can be phosphorylated in vitro by MLPK, ARK1, and ARK2 but not by SD1-29. | 0 |
| RefSeq | XP_039839867.1 | protein spotted leaf 11-like [Panicum virgatum] | 0 |
| A2ZLU6 | Protein spotted leaf 11 OS=Oryza sativa subsp. indica OX=39946 GN=SPL11 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9WP23 | RING-type E3 ubiquitin transferase OS=Eragrostis curvula OX=38414 GN=EJB05_00955 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology