Basic Information
Locus ID:
Zma_g25975
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr16 | 8575864 | 8582606 | + | Zma_g25975 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 82,455.32 Da | 54.16 | 76.51 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 108 | 210 | 1.31194E-13 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 477 | 723 | 4.07988E-133 | - |
| Pfam | PF00989 | PAS fold | 102 | 209 | 1.0E-14 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 472 | 723 | 4.9E-69 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 441 | 723 | 2.29E-85 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 98 | 206 | 4.71E-20 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 464 | 548 | 2.7E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 109 | 214 | 1.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 549 | 743 | 8.9E-64 | - |
| SMART | SM00091 | pas_2 | 99 | 166 | 4.2E-11 | IPR000014 |
| SMART | SM00220 | serkin_6 | 471 | 731 | 1.9E-61 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 104 | 214 | 5.9E-14 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 471 | 732 | 45.134823 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 97 | 168 | 19.020237 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 590 | 602 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 631 | 641 | 3.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 650 | 672 | 3.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 545 | 558 | 3.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 694 | 716 | 3.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 584 | 602 | 3.8E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 96 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 293 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 278 | 345 | - | - |
| Coils | Coil | Coil | 716 | 740 | - | - |
| Coils | Coil | Coil | 5 | 25 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_004962762.1 | probable serine/threonine-protein kinase SIS8 isoform X2 [Setaria italica] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RB94 | PAS domain-containing protein tyrosine kinase family protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50781 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology