Basic Information
Locus ID:
Zma_g25933
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Zinc-ribbon
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr16 | 8083768 | 8088043 | + | Zma_g25933 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 32,727.59 Da | 47.31 | 58.93 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF05495 | CHY zinc finger | 34 | 110 | 1.6E-20 | IPR008913 |
| Pfam | PF13639 | Ring finger domain | 164 | 207 | 5.4E-9 | IPR001841 |
| Pfam | PF14599 | Zinc-ribbon | 212 | 269 | 1.7E-25 | IPR039512 |
| SUPERFAMILY | SSF57850 | RING/U-box | 164 | 212 | 1.22E-10 | - |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 31 | 99 | 2.22E-18 | IPR037274 |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 101 | 158 | 3.53E-20 | IPR037275 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 158 | 209 | 1.1E-11 | IPR013083 |
| Gene3D | G3DSA:2.20.28.10 | - | 235 | 275 | 2.7E-18 | - |
| SMART | SM00184 | ring_2 | 165 | 207 | 4.2E-7 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 100 | 164 | 33.740265 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 27 | 98 | 25.039778 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 165 | 207 | 11.736875 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18650.1 | CHY-type/CTCHY-type/RING-type Zinc finger protein. | 0 |
| RefSeq | XP_039802150.1 | E3 ubiquitin-protein ligase MIEL1-like [Panicum virgatum] | 0 |
| Q8VZK0 | E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WMN8 | RING-type domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_01309 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology