Basic Information
Locus ID:
Zma_g25383
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
zinc finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr15 | 10893872 | 10894189 | - | Zma_g25383 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.99 | 12,047.14 Da | 40.66 | 85.33 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00098 | Zinc knuckle | 25 | 41 | 1.9E-5 | IPR001878 |
| SUPERFAMILY | SSF57756 | Retrovirus zinc finger-like domains | 17 | 61 | 2.69E-9 | IPR036875 |
| Gene3D | G3DSA:4.10.60.10 | - | 6 | 68 | 7.6E-11 | - |
| SMART | SM00343 | c2hcfinal6 | 44 | 60 | 4.1 | IPR001878 |
| SMART | SM00343 | c2hcfinal6 | 25 | 41 | 0.0021 | IPR001878 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 26 | 41 | 9.866995 | IPR001878 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 12 | gene.Thate01g12700, gene.Thate01g16320, gene.Thate01g21130 ... |
| Poaceae | Zoysia macrostachya | 1 | Zma_g25383 |