Basic Information
Locus ID:
Zma_g25191
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr15 | 9326751 | 9335032 | + | Zma_g25191 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.70 | 83,680.91 Da | 55.91 | 73.48 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 120 | 221 | 5.06193E-13 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 489 | 735 | 6.24759E-134 | - |
| Pfam | PF00989 | PAS fold | 112 | 218 | 4.2E-13 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 484 | 735 | 3.0E-69 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 451 | 735 | 2.02E-86 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 116 | 218 | 1.62E-18 | IPR035965 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 561 | 755 | 2.3E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 476 | 560 | 5.6E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 122 | 226 | 5.3E-23 | - |
| SMART | SM00220 | serkin_6 | 483 | 743 | 8.8E-63 | IPR000719 |
| SMART | SM00091 | pas_2 | 111 | 178 | 8.4E-9 | IPR000014 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 110 | 221 | 2.9E-12 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 109 | 180 | 16.34841 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 483 | 744 | 45.276161 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 602 | 614 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 596 | 614 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 662 | 684 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 706 | 728 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 557 | 570 | 6.7E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 643 | 653 | 6.7E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 427 | 446 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 342 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 360 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 305 | - | - |
| Coils | Coil | Coil | 728 | 748 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67890.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_004962762.1 | probable serine/threonine-protein kinase SIS8 isoform X2 [Setaria italica] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A811RB94 | PAS domain-containing protein tyrosine kinase family protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS50781 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology