Basic Information
Locus ID:
Zma_g2513
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr02 | 1044840 | 1048286 | + | Zma_g2513 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 57,044.56 Da | 50.19 | 56.00 | -1.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 459 | 490 | 2.4E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 361 | 443 | 6.0E-17 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 361 | 443 | 2.3E-25 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 365 | 416 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 98 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 172 | 219 | - | - |
| Coils | Coil | Coil | 350 | 392 | - | - |
| Coils | Coil | Coil | 395 | 424 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_004981310.1 | uncharacterized protein LOC101753781 [Setaria italica] | 0 |
| TrEMBL | A0A5J9WAS9 | PAPA-1 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03887 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology