Basic Information
Locus ID:
Zma_g25067
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr15 | 7806026 | 7823589 | + | Zma_g25067 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 131,567.20 Da | 42.85 | 77.25 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02659 | peptidase_C19C | 200 | 528 | 6.67466E-168 | - |
| CDD | cd00121 | MATH | 59 | 182 | 2.50087E-39 | IPR002083 |
| Pfam | PF00917 | MATH domain | 64 | 183 | 8.1E-20 | IPR002083 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 202 | 523 | 4.7E-46 | IPR001394 |
| Pfam | PF14533 | Ubiquitin-specific protease C-terminal | 889 | 1098 | 3.0E-57 | IPR029346 |
| Pfam | PF12436 | ICP0-binding domain of Ubiquitin-specific protease 7 | 627 | 879 | 5.7E-77 | IPR024729 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 197 | 553 | 3.73E-97 | IPR038765 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 55 | 190 | 2.13E-40 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 687 | 804 | 1.6E-45 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 55 | 198 | 6.0E-52 | IPR008974 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 199 | 527 | 1.0E-89 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 805 | 902 | 7.4E-28 | - |
| SMART | SM00061 | math_3 | 59 | 163 | 1.3E-21 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 57 | 182 | 38.315163 | IPR002083 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 202 | 526 | 40.332153 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 203 | 218 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 442 | 459 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 58 | - | - |
| Coils | Coil | Coil | 542 | 562 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06600.1 | ubiquitin-specific protease 12. Encodes a ubiquitin-specific protease. | 0 |
| RefSeq | XP_004962965.1 | ubiquitin carboxyl-terminal hydrolase 12 isoform X1 [Setaria italica] | 0 |
| Q9FPT1 | Ubiquitin C-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2 | 0 | |
| TrEMBL | K3Z3B3 | ubiquitinyl hydrolase 1 OS=Setaria italica OX=4555 GN=101783489 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology