Basic Information
Locus ID:
Zma_g24481
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Heat stress transcription factor B-2b
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr14 | 12611684 | 12613509 | - | Zma_g24481 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.59 | 43,436.96 Da | 70.67 | 62.58 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 41 | 130 | 7.4E-33 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 38 | 130 | 7.39E-35 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 33 | 131 | 9.3E-38 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 37 | 130 | 3.0E-60 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 80 | 104 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 79 | 91 | 3.5E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 92 | 104 | 3.5E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 41 | 64 | 3.5E-20 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 164 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 347 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 267 | 287 | - | - |
| Coils | Coil | Coil | 198 | 221 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62020.1 | heat shock transcription factor B2A. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_008677301.1 | uncharacterized protein LOC100283530 isoform X2 [Zea mays] | 0 |
| Q6Z9C8 | Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1 | 0 | |
| TrEMBL | B6TJ68 | Heat shock factor protein 7 OS=Zea mays OX=4577 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology