Basic Information
Locus ID:
Zma_g24416
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Short Name:
UBP2
Description:
Ubiquitinyl hydrolase 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr14 | 12192700 | 12196976 | - | Zma_g24416 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 99,049.29 Da | 48.23 | 69.36 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02257 | Peptidase_C19 | 330 | 481 | 2.33965E-12 | - |
| Pfam | PF02148 | Zn-finger in ubiquitin-hydrolases and other protein | 216 | 281 | 9.3E-8 | IPR001607 |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 330 | 879 | 1.1E-40 | IPR001394 |
| Pfam | PF02148 | Zn-finger in ubiquitin-hydrolases and other protein | 82 | 150 | 3.2E-6 | IPR001607 |
| SUPERFAMILY | SSF57850 | RING/U-box | 190 | 281 | 3.74E-12 | - |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 328 | 881 | 2.75E-65 | IPR038765 |
| SUPERFAMILY | SSF57850 | RING/U-box | 56 | 150 | 3.18E-10 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 50 | 166 | 1.3E-9 | IPR013083 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 558 | 883 | 2.4E-34 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 325 | 504 | 3.5E-26 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 187 | 285 | 1.7E-9 | IPR013083 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 80 | 150 | 12.87324 | IPR001607 |
| ProSiteProfiles | PS50271 | Zinc finger UBP-type profile. | 214 | 282 | 14.176735 | IPR001607 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 329 | 882 | 34.209442 | IPR028889 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 330 | 345 | - | IPR018200 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 812 | 831 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 653 | 722 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 668 | 707 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32780.1 | ubiquitin-specific protease 1. | 0 |
| RefSeq | XP_025797471.1 | ubiquitin carboxyl-terminal hydrolase 1-like [Panicum hallii] | 0 |
| Q9FPT5 | Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana OX=3702 GN=UBP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9T0R0 | ubiquitinyl hydrolase 1 (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48094 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology