Basic Information
Locus ID:
Zma_g24415
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Prokaryotic RING finger family 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr14 | 12190591 | 12191316 | - | Zma_g24415 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 24,741.64 Da | 56.41 | 79.63 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 193 | 230 | 9.46791E-8 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 190 | 236 | 2.3E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 192 | 237 | 1.41E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 168 | 241 | 4.5E-13 | IPR013083 |
| SMART | SM00184 | ring_2 | 193 | 230 | 1.9E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 193 | 231 | 11.559839 | IPR001841 |
| ProSitePatterns | PS00518 | Zinc finger RING-type signature. | 208 | 217 | - | IPR017907 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 121 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_039854814.1 | predicted GPI-anchored protein 58 [Panicum virgatum] | 0 |
| TrEMBL | A0A0A9DET2 | RING-type domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology