HalophFGD

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Basic Information
Locus ID: Zma_g24398
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr14 12105103 12105978 - Zma_g24398
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.25 32,753.37 Da 39.07 91.48 0.08
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 2 95 4.29298E-5 IPR002083
CDD cd18280 BTB_POZ_BPM_plant 110 224 1.80704E-45 -
Pfam PF00651 BTB/POZ domain 116 224 1.2E-26 IPR000210
SUPERFAMILY SSF54695 POZ domain 105 226 4.71E-33 IPR011333
SUPERFAMILY SSF49599 TRAF domain-like 2 100 8.67E-8 -
Gene3D G3DSA:1.25.40.420 - 227 290 1.0E-12 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 101 222 1.5E-36 IPR011333
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 1 100 5.6E-7 IPR008974
SMART SM00225 BTB_4 124 228 1.8E-25 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 124 185 18.885712 IPR000210
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT2G39760.1 BTB/POZ/MATH-domains containing protein. 0
RefSeq XP_012702339.1 BTB/POZ and MATH domain-containing protein 1 [Setaria italica] 0
Swiss-Prot O22286 BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 0
TrEMBL A0A5J9T136 BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48139 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 AH08.2117, AH08.2120, BH08.2227, BH08.2231, BH08.2233 ...
CH08.2406, CH08.2413, CH08.2414
Poaceae Eleusine coracana subsp. coracana 17 gene-QOZ80_7BG0590860, gene-QOZ80_8AG0629410 ...
gene-QOZ80_8AG0637760, gene-QOZ80_8AG0637770, gene-QOZ80_8AG0637780, gene-QOZ80_8AG0637790, gene-QOZ80_8AG0637810, gene-QOZ80_8AG0637840, gene-QOZ80_8AG0637850, gene-QOZ80_8AG0637860, gene-QOZ80_8AG0637870, gene-QOZ80_8BG0657720, gene-QOZ80_8BG0666280, gene-QOZ80_8BG0666290, gene-QOZ80_8BG0666300, gene-QOZ80_8BG0666310, gene-QOZ80_8BG0666330
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0022760.1.CDS1 ...
HORVU.MOREX.r3.7HG0664330.1.CDS1, HORVU.MOREX.r3.7HG0682430.1
Poaceae Lolium multiflorum 19 gene-QYE76_000085, gene-QYE76_009636, gene-QYE76_009638 ...
gene-QYE76_009646, gene-QYE76_009647, gene-QYE76_030105, gene-QYE76_030106, gene-QYE76_030107, gene-QYE76_030114, gene-QYE76_030115, gene-QYE76_030122, gene-QYE76_030164, gene-QYE76_030168, gene-QYE76_030169, gene-QYE76_030178, gene-QYE76_044268, gene-QYE76_044269, gene-QYE76_044273, gene-QYE76_044274
Poaceae Oryza coarctata 5 Oco15G010530, Oco15G010540, Oco15G010550, Oco15G010900 ...
Oco16G012000
Poaceae Oryza sativa 11 LOC_Os03g48120.1, LOC_Os08g40490.1, LOC_Os08g41120.1 ...
LOC_Os08g41150.1, LOC_Os08g41170.1, LOC_Os08g41180.1, LOC_Os08g41190.1, LOC_Os08g41200.1, LOC_Os08g41220.1, LOC_Os08g41240.1, LOC_Os09g06890.1
Poaceae Paspalum vaginatum 18 gene-BS78_07G112800, gene-BS78_07G194700 ...
gene-BS78_07G195100, gene-BS78_07G195200, gene-BS78_07G195400, gene-BS78_07G195500, gene-BS78_07G195600, gene-BS78_07G195800, gene-BS78_07G195900, gene-BS78_07G196000, gene-BS78_07G196100, gene-BS78_07G196400, gene-BS78_07G196500, gene-BS78_07G196600, gene-BS78_07G196700, gene-BS78_07G196900, gene-BS78_07G197000, gene-BS78_07G199000
Poaceae Puccinellia tenuiflora 8 Pt_Chr0403716, Pt_Chr0403738, Pt_Chr0403966, Pt_Chr0501975 ...
Pt_Chr0501977, Pt_Chr0502097, Pt_Chr0600381, Pt_Chr0704303
Poaceae Sporobolus alterniflorus 4 Chr16G017630, Chr17G016920, Chr17G016930, Chr17G016940
Poaceae Thinopyrum elongatum 9 Tel1E01G076000, Tel1E01G077100, Tel1E01G190600 ...
Tel1E01G190700, Tel1E01G191100, Tel1E01G191400, Tel7E01G450400, Tel7E01G450500, Tel7E01G450800
Poaceae Triticum dicoccoides 14 gene_TRIDC1AG004010, gene_TRIDC1AG017170 ...
gene_TRIDC1AG017180, gene_TRIDC1AG017240, gene_TRIDC1BG004930, gene_TRIDC1BG004970, gene_TRIDC1BG017630, gene_TRIDC1BG017640, gene_TRIDC2BG009930, gene_TRIDC4AG047600, gene_TRIDC7AG032950, gene_TRIDC7AG032960, gene_TRIDC7AG032970, gene_TRIDC7BG024090
Poaceae Triticum aestivum 23 TraesCS1A02G093100.1, TraesCS1A02G093500.1 ...
TraesCS1A02G093700.1, TraesCS1B02G044900.1.cds1, TraesCS1B02G050800.1.cds1, TraesCS1B02G120900.1, TraesCS1B02G121000.1.cds1, TraesCS1B02G121300.1.cds1, TraesCS1B02G121700.1.cds1, TraesCS1B02G121800.1, TraesCS1D02G036200.1.cds1, TraesCS1D02G036400.1.cds1, TraesCS1D02G102100.1.cds1, TraesCS1D02G102200.1.cds1, TraesCS1D02G102300.1, TraesCS7A02G255200.1.cds1, TraesCS7A02G255300.2, TraesCS7B02G080600.1.cds1, TraesCS7B02G151400.1.cds1, TraesCS7B02G151500.1, TraesCS7B02G151600.1.cds1, TraesCS7D02G176800.1.cds1, TraesCS7D02G253700.1.cds1
Poaceae Zea mays 9 Zm00001eb035890_P001, Zm00001eb035900_P001 ...
Zm00001eb035910_P001, Zm00001eb035940_P001, Zm00001eb174790_P001, Zm00001eb174830_P001, Zm00001eb174850_P001, Zm00001eb202820_P001, Zm00001eb328550_P001
Poaceae Zoysia japonica 5 nbis-gene-17476, nbis-gene-42645, nbis-gene-42646 ...
nbis-gene-55558, nbis-gene-57528
Poaceae Zoysia macrostachya 10 Zma_g13254, Zma_g23281, Zma_g23282, Zma_g23283, Zma_g23284 ...
Zma_g23286, Zma_g24396, Zma_g24397, Zma_g24398, Zma_g29496
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.