HalophFGD

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Basic Information
Locus ID: Zma_g24397
Species & Taxonomic ID: Zoysia macrostachya & 121788
Genome Assembly: GCA_049640385.1
Description: BTB/POZ domain
Maps and Mapping Data
Chromosome Start End Strand ID
Zma_chr14 12097055 12103478 - Zma_g24397
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.85 40,800.52 Da 41.27 93.79 0.09
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd00121 MATH 47 169 1.05381E-10 IPR002083
Pfam PF00651 BTB/POZ domain 188 298 6.2E-23 IPR000210
SUPERFAMILY SSF54695 POZ domain 176 331 1.65E-30 IPR011333
SUPERFAMILY SSF49599 TRAF domain-like 52 174 3.71E-17 -
Gene3D G3DSA:2.60.210.10 Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 47 174 1.6E-15 IPR008974
Gene3D G3DSA:1.25.40.420 - 301 363 1.0E-12 -
Gene3D G3DSA:3.30.710.10 Potassium Channel Kv1.1; Chain A 175 296 1.6E-31 IPR011333
SMART SM00225 BTB_4 198 302 1.1E-20 IPR000210
ProSiteProfiles PS50097 BTB domain profile. 198 265 18.410025 IPR000210
ProSiteProfiles PS50144 MATH/TRAF domain profile. 43 169 8.628971 IPR002083
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
KEGG Pathway
KO Term:
K10523 (speckle-type POZ protein)
Pathway:
ko04340 (Hedgehog signaling pathway) map04340 (Hedgehog signaling pathway) ko04341 (Hedgehog signaling pathway - fly) map04341 (Hedgehog signaling pathway - fly)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G19000.1 BTB-POZ and MATH domain 1. 0
RefSeq XP_047070174.1 BTB/POZ and MATH domain-containing protein 2-like isoform X1 [Lolium rigidum] 0
Swiss-Prot Q8L765 BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 0
TrEMBL A0A5J9T166 BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48131 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 AH08.2117, AH08.2120, BH08.2227, BH08.2231, BH08.2233 ...
CH08.2406, CH08.2413, CH08.2414
Poaceae Eleusine coracana subsp. coracana 17 gene-QOZ80_7BG0590860, gene-QOZ80_8AG0629410 ...
gene-QOZ80_8AG0637760, gene-QOZ80_8AG0637770, gene-QOZ80_8AG0637780, gene-QOZ80_8AG0637790, gene-QOZ80_8AG0637810, gene-QOZ80_8AG0637840, gene-QOZ80_8AG0637850, gene-QOZ80_8AG0637860, gene-QOZ80_8AG0637870, gene-QOZ80_8BG0657720, gene-QOZ80_8BG0666280, gene-QOZ80_8BG0666290, gene-QOZ80_8BG0666300, gene-QOZ80_8BG0666310, gene-QOZ80_8BG0666330
Poaceae Hordeum vulgare 3 HORVU.MOREX.r3.1HG0022760.1.CDS1 ...
HORVU.MOREX.r3.7HG0664330.1.CDS1, HORVU.MOREX.r3.7HG0682430.1
Poaceae Lolium multiflorum 19 gene-QYE76_000085, gene-QYE76_009636, gene-QYE76_009638 ...
gene-QYE76_009646, gene-QYE76_009647, gene-QYE76_030105, gene-QYE76_030106, gene-QYE76_030107, gene-QYE76_030114, gene-QYE76_030115, gene-QYE76_030122, gene-QYE76_030164, gene-QYE76_030168, gene-QYE76_030169, gene-QYE76_030178, gene-QYE76_044268, gene-QYE76_044269, gene-QYE76_044273, gene-QYE76_044274
Poaceae Oryza coarctata 5 Oco15G010530, Oco15G010540, Oco15G010550, Oco15G010900 ...
Oco16G012000
Poaceae Oryza sativa 11 LOC_Os03g48120.1, LOC_Os08g40490.1, LOC_Os08g41120.1 ...
LOC_Os08g41150.1, LOC_Os08g41170.1, LOC_Os08g41180.1, LOC_Os08g41190.1, LOC_Os08g41200.1, LOC_Os08g41220.1, LOC_Os08g41240.1, LOC_Os09g06890.1
Poaceae Paspalum vaginatum 18 gene-BS78_07G112800, gene-BS78_07G194700 ...
gene-BS78_07G195100, gene-BS78_07G195200, gene-BS78_07G195400, gene-BS78_07G195500, gene-BS78_07G195600, gene-BS78_07G195800, gene-BS78_07G195900, gene-BS78_07G196000, gene-BS78_07G196100, gene-BS78_07G196400, gene-BS78_07G196500, gene-BS78_07G196600, gene-BS78_07G196700, gene-BS78_07G196900, gene-BS78_07G197000, gene-BS78_07G199000
Poaceae Puccinellia tenuiflora 8 Pt_Chr0403716, Pt_Chr0403738, Pt_Chr0403966, Pt_Chr0501975 ...
Pt_Chr0501977, Pt_Chr0502097, Pt_Chr0600381, Pt_Chr0704303
Poaceae Sporobolus alterniflorus 4 Chr16G017630, Chr17G016920, Chr17G016930, Chr17G016940
Poaceae Thinopyrum elongatum 9 Tel1E01G076000, Tel1E01G077100, Tel1E01G190600 ...
Tel1E01G190700, Tel1E01G191100, Tel1E01G191400, Tel7E01G450400, Tel7E01G450500, Tel7E01G450800
Poaceae Triticum dicoccoides 14 gene_TRIDC1AG004010, gene_TRIDC1AG017170 ...
gene_TRIDC1AG017180, gene_TRIDC1AG017240, gene_TRIDC1BG004930, gene_TRIDC1BG004970, gene_TRIDC1BG017630, gene_TRIDC1BG017640, gene_TRIDC2BG009930, gene_TRIDC4AG047600, gene_TRIDC7AG032950, gene_TRIDC7AG032960, gene_TRIDC7AG032970, gene_TRIDC7BG024090
Poaceae Triticum aestivum 23 TraesCS1A02G093100.1, TraesCS1A02G093500.1 ...
TraesCS1A02G093700.1, TraesCS1B02G044900.1.cds1, TraesCS1B02G050800.1.cds1, TraesCS1B02G120900.1, TraesCS1B02G121000.1.cds1, TraesCS1B02G121300.1.cds1, TraesCS1B02G121700.1.cds1, TraesCS1B02G121800.1, TraesCS1D02G036200.1.cds1, TraesCS1D02G036400.1.cds1, TraesCS1D02G102100.1.cds1, TraesCS1D02G102200.1.cds1, TraesCS1D02G102300.1, TraesCS7A02G255200.1.cds1, TraesCS7A02G255300.2, TraesCS7B02G080600.1.cds1, TraesCS7B02G151400.1.cds1, TraesCS7B02G151500.1, TraesCS7B02G151600.1.cds1, TraesCS7D02G176800.1.cds1, TraesCS7D02G253700.1.cds1
Poaceae Zea mays 9 Zm00001eb035890_P001, Zm00001eb035900_P001 ...
Zm00001eb035910_P001, Zm00001eb035940_P001, Zm00001eb174790_P001, Zm00001eb174830_P001, Zm00001eb174850_P001, Zm00001eb202820_P001, Zm00001eb328550_P001
Poaceae Zoysia japonica 5 nbis-gene-17476, nbis-gene-42645, nbis-gene-42646 ...
nbis-gene-55558, nbis-gene-57528
Poaceae Zoysia macrostachya 10 Zma_g13254, Zma_g23281, Zma_g23282, Zma_g23283, Zma_g23284 ...
Zma_g23286, Zma_g24396, Zma_g24397, Zma_g24398, Zma_g29496
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.