Basic Information
Locus ID:
Zma_g23702
Species & Taxonomic ID:
Zoysia macrostachya & 121788
Genome Assembly:
GCA_049640385.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zma_chr14 | 1685132 | 1686508 | - | Zma_g23702 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.38 | 50,334.45 Da | 58.87 | 82.03 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 409 | 449 | 1.44998E-7 | - |
| Pfam | PF13639 | Ring finger domain | 408 | 449 | 3.4E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 400 | 454 | 3.53E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 389 | 456 | 1.4E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 409 | 448 | 0.0048 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 409 | 449 | 10.689412 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 402 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 190 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_035819143.1 | uncharacterized protein LOC103642511 [Zea mays] | 0 |
| TrEMBL | A0A5J9W516 | RING-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_09457 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology